For the update today, I have had a look at the current state of the NCBI SKY/CGH database. I (re-) wrote a parser for their XML file format, which currently only interprets CGH annotations.
Of the 840 human CGH cases from the current NCBI Sky/CGH XML dump, about 600 were included into th edatabase from this source; the remaining cases had been collected from the literature or submitted by the authors to Progenetix.
For cases with both SKY and CGH data, the MFISH/SKY information will be added later.